STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04439.1PFAM: transport system permease protein; KEGG: pvi:Cvib_0818 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (341 aa)    
Predicted Functional Partners:
ACE04438.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1135 ATPase.
 
 
 0.996
ACE04449.1
PFAM: periplasmic binding protein; KEGG: pvi:Cvib_0804 periplasmic binding protein.
 
 
 0.974
ACE04444.1
KEGG: pvi:Cvib_0813 hypothetical protein.
 
 
 0.898
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
     
 0.804
ACE04441.1
TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: pvi:Cvib_0815 L-threonine O-3-phosphate decarboxylase.
  
  
 0.793
ACE05434.1
KEGG: mla:Mlab_0855 GTP-binding signal recognition particle SRP54, G-domain.
  
 
 0.782
ACE05445.1
KEGG: dvu:DVU2021 hypothetical protein.
  
 
 0.782
ACE04445.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein.
 
  
 0.617
ACE05109.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pvi:Cvib_0321 TonB-dependent receptor, plug.
 
  
 0.488
ACE04437.1
TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: pdi:BDI_1239 putative ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.480
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.