Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACE04439.1PFAM: transport system permease protein; KEGG: pvi:Cvib_0818 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (341 aa)    
Predicted Functional Partners:
ACE04438.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1135 ATPase.
 
 0.990
ACE04449.1
PFAM: periplasmic binding protein; KEGG: pvi:Cvib_0804 periplasmic binding protein.
 
 0.952
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
     
 0.813
ACE04444.1
KEGG: pvi:Cvib_0813 hypothetical protein.
 
 0.795
ACE04441.1
TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: pvi:Cvib_0815 L-threonine O-3-phosphate decarboxylase.
     
 0.793
ACE04445.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein.
 
   
 0.630
ACE05434.1
KEGG: mla:Mlab_0855 GTP-binding signal recognition particle SRP54, G-domain.
  
 0.561
ACE05445.1
KEGG: dvu:DVU2021 hypothetical protein.
  
 0.561
ACE04704.1
KEGG: cte:CT1821 ABC transporter, ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
  
  0.541
ACE04705.1
KEGG: cte:CT1822 ABC transporter, ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
  0.497
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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