STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04449.1PFAM: periplasmic binding protein; KEGG: pvi:Cvib_0804 periplasmic binding protein. (299 aa)    
Predicted Functional Partners:
ACE04439.1
PFAM: transport system permease protein; KEGG: pvi:Cvib_0818 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.974
ACE04438.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1135 ATPase.
 
 
 0.955
ACE04448.1
PFAM: NUDIX hydrolase; KEGG: cch:Cag_0727 NUDIX/MutT family protein; Belongs to the Nudix hydrolase family.
       0.786
ACE04450.1
PFAM: major facilitator superfamily MFS_1; KEGG: plt:Plut_1149 drug resistance protein, putative.
  
  
 0.520
ACE03613.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sru:SRU_2108 TonB dependent receptor, putative.
  
  
 0.508
ACE04760.1
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: plt:Plut_0050 uroporphyrin-III C-methyltransferase-like.
     
 0.458
ACE04305.1
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: plt:Plut_0999 5-oxoprolinase (ATP-hydrolyzing).
     
 0.455
ACE04543.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.446
ACE04445.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein.
 
  
 0.427
ACE04451.1
PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cte:CT0990 polyA polymerase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.401
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.