Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE04451.1PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cte:CT0990 polyA polymerase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (475 aa)    
Predicted Functional Partners:
ACE03501.1
KEGG: plt:Plut_1647 hypothetical protein.
  
     0.735
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.727
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
  
  
 0.714
ACE04368.1
KEGG: cte:CT1194 hypothetical protein.
 
    0.658
ACE03710.1
KEGG: cte:CT1080 hypothetical protein.
 
  0.648
ACE04450.1
PFAM: major facilitator superfamily MFS_1; KEGG: plt:Plut_1149 drug resistance protein, putative.
       0.642
ACE04994.1
KEGG: fjo:Fjoh_0204 hypothetical protein.
  
     0.636
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.617
ACE05123.1
PFAM: WD-40 repeat protein; KEGG: cte:CT1986 WD-repeat family protein.
  
  0.596
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
 
    0.575
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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