Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE04462.1PFAM: phytase; KEGG: fjo:Fjoh_1367 phytase. (356 aa)    
Predicted Functional Partners:
ACE04461.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bfs:BF4328 putative TonB-dependent outer membrane receptor protein.
 
     0.893
ACE03570.1
KEGG: plt:Plut_1597 hypothetical protein.
  
     0.440
ACE04004.1
PFAM: pentapeptide repeat protein; KEGG: cch:Cag_1295 MCBG protein (microcin resistance protein)-like.
  
     0.424
ACE03697.1
KEGG: abu:Abu_1172 conserved hypothetical protein, putative DNA helicase.
  
    0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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