Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE04486.1Major paralogous domain; KEGG: cch:Cag_0884 Fibrobacter succinogenes major paralogous domain. (236 aa)    
Predicted Functional Partners:
ACE04964.1
KEGG: cte:CT1571 hypothetical protein.
  
    0.580
ACE04962.1
KEGG: cte:CT1571 hypothetical protein.
  
    0.569
ACE04487.1
KEGG: plt:Plut_1000 hypothetical protein.
 
     0.555
ACE04965.1
KEGG: cte:CT1571 hypothetical protein.
  
     0.536
ACE04963.1
PFAM: regulatory protein LuxR; KEGG: cte:CT1571 hypothetical protein.
  
    0.498
ACE03211.1
KEGG: cte:CT2087 esterase/lipase, putative.
  
     0.488
ACE04074.1
KEGG: pvi:Cvib_0787 hypothetical protein.
  
     0.404
ACE04712.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0361 hypothetical protein.
  
     0.403
ACE03627.1
KEGG: cte:CT0397 hypothetical protein.
  
     0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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