STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04547.1PFAM: permease YjgP/YjgQ family protein; KEGG: cte:CT0740 hypothetical protein. (441 aa)    
Predicted Functional Partners:
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
 
 
 0.969
ACE04943.1
PFAM: permease YjgP/YjgQ family protein; KEGG: pvi:Cvib_0444 permease YjgP/YjgQ family protein.
 
  
 
0.937
ACE03378.1
PFAM: protein of unknown function DUF1239; KEGG: pvi:Cvib_1550 protein of unknown function DUF1239.
 
 
 0.853
ACE05148.1
KEGG: plt:Plut_0223 hypothetical protein.
  
     0.759
ACE03398.1
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cte:CT0266 bacterial surface antigen family protein.
 
     0.727
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
 
     0.719
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.663
ACE04537.1
PFAM: outer membrane efflux protein; KEGG: plt:Plut_0733 outer membrane efflux protein, putative.
  
     0.659
ACE04914.1
KEGG: cte:CT1770 hypothetical protein.
  
     0.647
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
 
  
 0.626
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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