STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04556.1TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: plt:Plut_0708 secretion protein HlyD. (387 aa)    
Predicted Functional Partners:
ACE04555.1
PFAM: acriflavin resistance protein; KEGG: plt:Plut_0709 RND family efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.915
ACE04554.1
PFAM: outer membrane efflux protein; KEGG: pvi:Cvib_1116 outer membrane efflux protein.
 
 
 0.874
ACE04557.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: dsy:DSY3432 hypothetical protein.
     
 0.759
ACE04146.1
Hypothetical protein; KEGG: bfs:BF0908 putative outer membrane protein.
  
     0.668
ACE03088.1
KEGG: vco:VC0395_0417 hypothetical protein.
  
     0.664
ACE04482.1
KEGG: hch:HCH_04190 hypothetical protein.
  
     0.622
ACE04023.1
KEGG: cyt:cce_0300 hypothetical protein.
  
     0.605
ACE04151.1
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: chu:CHU_3753 hypothetical protein.
  
     0.548
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
 
 
 0.516
ACE04150.1
Putative adenylate/guanylate cyclase; KEGG: gfo:GFO_0037 membrane protein containing adenylate/guanylate cyclase catalytic domain.
  
     0.507
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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