STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04558.1PFAM: NUDIX hydrolase; KEGG: pvi:Cvib_1119 NUDIX hydrolase. (138 aa)    
Predicted Functional Partners:
ACE04557.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: dsy:DSY3432 hypothetical protein.
  
    0.507
ACE04556.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: plt:Plut_0708 secretion protein HlyD.
  
    0.505
ACE04559.1
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: plt:Plut_0673 glucose-1-phosphate thymidylyltransferase.
  
    0.491
ACE03751.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
     0.471
ACE03742.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
  
     0.418
ACE03740.1
PFAM: cyclase/dehydrase; KEGG: cte:CT0537 hypothetical protein.
  
     0.415
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.