STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04580.1PFAM: protein of unknown function DUF45; KEGG: pvi:Cvib_1130 protein of unknown function DUF45. (244 aa)    
Predicted Functional Partners:
ACE04581.1
PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_4286 hypothetical protein.
       0.752
ACE03121.1
PFAM: protein of unknown function DUF45; KEGG: ava:Ava_1155 metal-dependent hydrolase-like.
  
     0.728
ACE04582.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA1805 HlyD family secretion protein.
  
    0.546
ACE04583.1
Type I secretion system ATPase; KEGG: eba:ebA1807 ABC transporter, ATP-binding/permease; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
       0.545
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
       0.467
ACE05442.1
PFAM: restriction modification system DNA specificity domain; KEGG: bld:BLi04316 hypothetical protein.
 
     0.432
ACE05437.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.409
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.