STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04603.1PFAM: AIG2 family protein; KEGG: dno:DNO_0184 conserved hypothetical protein VrlH. (185 aa)    
Predicted Functional Partners:
ACE04604.1
KEGG: dde:Dde_1864 glucosamine 6-phosphate synthetase-like.
 
   
 0.949
ACE04602.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dno:DNO_0183 conserved hypothetical protein VrlI.
 
     0.869
ACE04593.1
PFAM: restriction endonuclease; KEGG: dde:Dde_1858 restriction endonuclease-like.
 
     0.810
ACE04605.1
KEGG: sfu:Sfum_3841 hypothetical protein.
       0.773
ACE04591.1
KEGG: esa:ESA_pESA3p05522 hypothetical protein.
 
     0.553
ACE04590.1
PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: esa:ESA_pESA3p05523 hypothetical protein.
 
     0.524
ACE04592.1
KEGG: esa:ESA_pESA3p05521 hypothetical protein.
 
     0.517
ACE04601.1
PFAM: Protein of unkown function DUF1819 putative inner membrane; KEGG: maq:Maqu_0555 hypothetical protein.
       0.506
ACE04596.1
KEGG: dvu:DVU2022 hypothetical protein.
       0.489
ACE04600.1
PFAM: Domain of unknown function DUF1788; KEGG: dvu:DVU2026 hypothetical protein.
       0.482
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.