Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE04605.1KEGG: sfu:Sfum_3841 hypothetical protein. (53 aa)    
Predicted Functional Partners:
ACE04603.1
PFAM: AIG2 family protein; KEGG: dno:DNO_0184 conserved hypothetical protein VrlH.
       0.773
ACE04604.1
KEGG: dde:Dde_1864 glucosamine 6-phosphate synthetase-like.
       0.773
ACE04601.1
PFAM: Protein of unkown function DUF1819 putative inner membrane; KEGG: maq:Maqu_0555 hypothetical protein.
       0.506
ACE04602.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dno:DNO_0183 conserved hypothetical protein VrlI.
       0.506
ACE04600.1
PFAM: Domain of unknown function DUF1788; KEGG: dvu:DVU2026 hypothetical protein.
       0.482
ACE04596.1
KEGG: dvu:DVU2022 hypothetical protein.
       0.467
ACE04597.1
KEGG: dvu:DVU2023 hypothetical protein.
       0.467
ACE04598.1
KEGG: dvu:DVU2024 hypothetical protein.
       0.467
ACE04599.1
KEGG: dvu:DVU2025 hypothetical protein.
       0.467
ACE04595.1
PFAM: PglZ domain protein; KEGG: dvu:DVU2020 hypothetical protein.
       0.458
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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