STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04619.1Amine oxidase; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0649 carotenoid isomerase, putative. (503 aa)    
Predicted Functional Partners:
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
 
 
 0.976
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
 
 
 0.976
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
 
  
 0.974
ACE04899.1
PFAM: hydroxyneurosporene synthase; KEGG: pvi:Cvib_1502 hydroxyneurosporene synthase.
  
 
 0.923
ACE03913.1
PFAM: Squalene/phytoene synthase; KEGG: cte:CT1386 phytoene desaturase.
 
  
 0.863
ACE03012.1
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cte:CT2256 geranylgeranyl hydrogenase.
 
  
 0.706
ACE04027.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1105 bacteriochlorophyll/chlorophyll a synthase.
 
  
 0.677
ACE03988.1
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.676
ACE05132.1
PFAM: UbiA prenyltransferase; KEGG: cte:CT1992 bacteriochlorophyll a synthase.
 
  
 0.656
ACE04301.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cch:Cag_1016 hypothetical protein.
  
     0.637
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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