Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE04627.1TIGRFAM: tol-pal system protein YbgF; KEGG: pvi:Cvib_1161 tetratricopeptide domain protein. (267 aa)    
Predicted Functional Partners:
pal
TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: plt:Plut_0616 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
  
 0.839
ACE04629.1
PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller.
 
  
 0.821
ACE04632.1
TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT0633 ExbB/TolQ family protein.
 
  
 0.611
ACE04631.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein.
 
  
 0.596
ACE04911.1
PFAM: RNA binding S1 domain protein; KEGG: cch:Cag_0570 30S ribosomal protein S1.
 
    0.464
ACE04270.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1103 conserved hypothetical protein.
  
     0.420
ACE05118.1
PFAM: Peptidase M23; KEGG: pvi:Cvib_0313 peptidase M23B.
  
    0.401
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.