Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
palTIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: plt:Plut_0616 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family. (158 aa)    
Predicted Functional Partners:
ACE04627.1
TIGRFAM: tol-pal system protein YbgF; KEGG: pvi:Cvib_1161 tetratricopeptide domain protein.
 
  
 0.839
ACE04629.1
PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller.
 
 
 0.835
ACE04632.1
TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT0633 ExbB/TolQ family protein.
 
   
 0.776
ACE04631.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein.
 
 
 
 0.774
ACE04271.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1102 probable ABC transporter permease protein.
  
 
 
 0.748
ACE04270.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1103 conserved hypothetical protein.
  
 
 
 0.654
ACE04542.1
KEGG: bav:BAV1041 outer membrane porin protein.
   
 0.625
ACE04889.1
KEGG: plt:Plut_0763 hypothetical protein.
   
 0.594
ACE04911.1
PFAM: RNA binding S1 domain protein; KEGG: cch:Cag_0570 30S ribosomal protein S1.
 
  
 0.573
ACE03613.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sru:SRU_2108 TonB dependent receptor, putative.
    
 0.556
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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