STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04629.1PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller. (444 aa)    
Predicted Functional Partners:
pal
TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: plt:Plut_0616 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
 
 0.881
ACE04632.1
TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT0633 ExbB/TolQ family protein.
 
  
 0.880
ACE04627.1
TIGRFAM: tol-pal system protein YbgF; KEGG: pvi:Cvib_1161 tetratricopeptide domain protein.
 
  
 0.872
ACE04631.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein.
 
  
 0.871
ACE04630.1
KEGG: cte:CT0635 hypothetical protein.
 
 
 0.825
ACE03397.1
KEGG: plt:Plut_1752 hypothetical protein.
  
 
 0.727
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
  
 
 0.684
ACE03938.1
PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: plt:Plut_1338 OmpA family protein.
 
 
 0.629
ACE04695.1
SMART: Tetratricopeptide domain protein; KEGG: cte:CT1812 hypothetical protein.
  
  
 0.615
ACE04980.1
PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_1814 OmpA/MotB.
 
 
 0.614
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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