Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACE04657.1 | ACE04659.1 | Cphamn1_1739 | Cphamn1_1741 | PFAM: Rieske [2Fe-2S] domain protein; KEGG: msm:MSMEG_5593 pyruvate dehydrogenase. | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | 0.500 |
ACE04657.1 | corA | Cphamn1_1739 | Cphamn1_1740 | PFAM: Rieske [2Fe-2S] domain protein; KEGG: msm:MSMEG_5593 pyruvate dehydrogenase. | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | 0.623 |
ACE04659.1 | ACE04657.1 | Cphamn1_1741 | Cphamn1_1739 | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | PFAM: Rieske [2Fe-2S] domain protein; KEGG: msm:MSMEG_5593 pyruvate dehydrogenase. | 0.500 |
ACE04659.1 | ACE04813.1 | Cphamn1_1741 | Cphamn1_1896 | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | KEGG: nar:Saro_2540 hypothetical protein. | 0.421 |
ACE04659.1 | corA | Cphamn1_1741 | Cphamn1_1740 | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | 0.649 |
ACE04813.1 | ACE04659.1 | Cphamn1_1896 | Cphamn1_1741 | KEGG: nar:Saro_2540 hypothetical protein. | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | 0.421 |
corA | ACE04657.1 | Cphamn1_1740 | Cphamn1_1739 | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | PFAM: Rieske [2Fe-2S] domain protein; KEGG: msm:MSMEG_5593 pyruvate dehydrogenase. | 0.623 |
corA | ACE04659.1 | Cphamn1_1740 | Cphamn1_1741 | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | PFAM: conserved hypothetical protein; KEGG: hne:HNE_0896 hypothetical protein. | 0.649 |