STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04706.1PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: pvi:Cvib_0516 lipocalin family protein; Belongs to the calycin superfamily. Lipocalin family. (176 aa)    
Predicted Functional Partners:
ACE03086.1
Domain of unknown function DUF1731; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: cte:CT0131 hypothetical protein.
      0.606
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
  
    0.596
ACE04712.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0361 hypothetical protein.
       0.448
ACE04708.1
PFAM: glycosyl transferase family 39; KEGG: plt:Plut_1792 hypothetical protein.
       0.437
ACE04709.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: pvi:Cvib_0514 phosphoesterase, PA-phosphatase related.
       0.437
ACE04710.1
PFAM: glycosyl transferase family 39; KEGG: cch:Cag_0606 hypothetical protein.
       0.437
ACE04711.1
PFAM: glycosyl transferase family 2; KEGG: pvi:Cvib_0512 glycosyl transferase, family 2.
       0.429
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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