STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04709.1PFAM: phosphoesterase PA-phosphatase related; KEGG: pvi:Cvib_0514 phosphoesterase, PA-phosphatase related. (225 aa)    
Predicted Functional Partners:
ACE04712.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0361 hypothetical protein.
 
    0.802
ACE04708.1
PFAM: glycosyl transferase family 39; KEGG: plt:Plut_1792 hypothetical protein.
  
  
 0.800
ACE04710.1
PFAM: glycosyl transferase family 39; KEGG: cch:Cag_0606 hypothetical protein.
  
  
 0.800
ACE04711.1
PFAM: glycosyl transferase family 2; KEGG: pvi:Cvib_0512 glycosyl transferase, family 2.
       0.765
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
 
     0.631
ACE05454.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: cte:CT0007 PAP2 superfamily protein.
  
     0.628
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.497
ACE04153.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: gfo:GFO_3394 secreted PAP2 superfamily protein.
  
     0.467
ACE04326.1
PFAM: AMP-dependent synthetase and ligase; KEGG: plt:Plut_2064 long-chain fatty-acid-CoA ligase.
    
 0.464
ACE04988.1
TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: cte:CT1848 O-succinylbenzoic acid--CoA ligase.
    
 0.464
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.