node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACE04645.1 | pdaD | Cphamn1_1727 | Cphamn1_1809 | Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: cte:CT1508 hypothetical protein; Belongs to the agmatine deiminase family. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.903 |
ACE04722.1 | ACE04723.1 | Cphamn1_1804 | Cphamn1_1805 | Signal transduction histidine kinase, LytS; TIGRFAM: rod shape-determining protein MreD; KEGG: cte:CT0567 hypothetical protein. | Penicillin-binding protein 2; KEGG: plt:Plut_0571 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. | 0.787 |
ACE04722.1 | pdaD | Cphamn1_1804 | Cphamn1_1809 | Signal transduction histidine kinase, LytS; TIGRFAM: rod shape-determining protein MreD; KEGG: cte:CT0567 hypothetical protein. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.431 |
ACE04722.1 | smpB | Cphamn1_1804 | Cphamn1_1807 | Signal transduction histidine kinase, LytS; TIGRFAM: rod shape-determining protein MreD; KEGG: cte:CT0567 hypothetical protein. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.765 |
ACE04722.1 | tyrS | Cphamn1_1804 | Cphamn1_1808 | Signal transduction histidine kinase, LytS; TIGRFAM: rod shape-determining protein MreD; KEGG: cte:CT0567 hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. | 0.596 |
ACE04723.1 | ACE04722.1 | Cphamn1_1805 | Cphamn1_1804 | Penicillin-binding protein 2; KEGG: plt:Plut_0571 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. | Signal transduction histidine kinase, LytS; TIGRFAM: rod shape-determining protein MreD; KEGG: cte:CT0567 hypothetical protein. | 0.787 |
ACE04723.1 | pdaD | Cphamn1_1805 | Cphamn1_1809 | Penicillin-binding protein 2; KEGG: plt:Plut_0571 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.431 |
ACE04723.1 | smpB | Cphamn1_1805 | Cphamn1_1807 | Penicillin-binding protein 2; KEGG: plt:Plut_0571 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.768 |
ACE04723.1 | tyrS | Cphamn1_1805 | Cphamn1_1808 | Penicillin-binding protein 2; KEGG: plt:Plut_0571 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. | 0.597 |
ACE04728.1 | ACE04729.1 | Cphamn1_1810 | Cphamn1_1811 | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | 0.714 |
ACE04728.1 | ACE04730.1 | Cphamn1_1810 | Cphamn1_1812 | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.660 |
ACE04728.1 | pdaD | Cphamn1_1810 | Cphamn1_1809 | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.596 |
ACE04728.1 | tyrS | Cphamn1_1810 | Cphamn1_1808 | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. | 0.435 |
ACE04729.1 | ACE04728.1 | Cphamn1_1811 | Cphamn1_1810 | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | 0.714 |
ACE04729.1 | ACE04730.1 | Cphamn1_1811 | Cphamn1_1812 | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.711 |
ACE04729.1 | pdaD | Cphamn1_1811 | Cphamn1_1809 | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.542 |
ACE04729.1 | tyrS | Cphamn1_1811 | Cphamn1_1808 | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. | 0.403 |
ACE04730.1 | ACE04728.1 | Cphamn1_1812 | Cphamn1_1810 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein. | 0.660 |
ACE04730.1 | ACE04729.1 | Cphamn1_1812 | Cphamn1_1811 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368. | 0.711 |
ACE04730.1 | pdaD | Cphamn1_1812 | Cphamn1_1809 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | KEGG: cte:CT0562 pyruvoyl-dependent arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.502 |