STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04779.1PFAM: Rhodanese domain protein; KEGG: cte:CT0843 hypothetical protein. (161 aa)    
Predicted Functional Partners:
ACE03491.1
KEGG: plt:Plut_1657 hypothetical protein.
 
     0.565
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.545
ACE03935.1
KEGG: cch:Cag_1145 hypothetical protein.
  
     0.540
ACE03810.1
PFAM: major facilitator superfamily MFS_1; KEGG: pvi:Cvib_1297 major facilitator superfamily MFS_1.
  
    0.529
ACE04388.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.520
ACE05022.1
KEGG: cya:CYA_0261 hypothetical protein.
  
     0.517
ACE05045.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_0248 protoporphyrinogen oxidase, putative.
  
     0.511
ACE03936.1
KEGG: lch:Lcho_1136 hypothetical protein.
  
 
   0.504
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.465
ACE03998.1
Methyltransferase type 11; PFAM: putative RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; KEGG: cte:CT0383 methlytransferase, putative.
  
     0.457
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.