Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE04788.1PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140. (264 aa)    
Predicted Functional Partners:
ACE04789.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0326 ABC transporter, ATP-binding protein.
 
 0.999
ACE04790.1
PFAM: Mammalian cell entry related domain protein; KEGG: cte:CT0325 VpsC protein.
 
 0.996
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
   
 0.918
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
 
  
  0.889
ACE04943.1
PFAM: permease YjgP/YjgQ family protein; KEGG: pvi:Cvib_0444 permease YjgP/YjgQ family protein.
  
  
 0.887
ACE04547.1
PFAM: permease YjgP/YjgQ family protein; KEGG: cte:CT0740 hypothetical protein.
  
  
 0.869
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
     
 0.812
ACE03544.1
PFAM: extracellular solute-binding protein family 5; KEGG: cte:CT1632 peptide ABC transporter, periplasmic peptide-binding protein.
     
  0.803
ACE03885.1
PFAM: extracellular solute-binding protein family 5; KEGG: cte:CT1420 peptide ABC transporter, periplasmic peptide-binding protein, putative.
     
  0.803
ACE04068.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_4291 ABC transporter related.
     
  0.803
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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