STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04788.1PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140. (264 aa)    
Predicted Functional Partners:
ACE04789.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0326 ABC transporter, ATP-binding protein.
 0.999
ACE04790.1
PFAM: Mammalian cell entry related domain protein; KEGG: cte:CT0325 VpsC protein.
 
 0.994
ACE04787.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cch:Cag_0481 phosphoesterase PHP-like.
       0.776
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
   
   0.748
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
 
  
  0.649
ACE04791.1
PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease, putative.
       0.550
ACE03412.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.536
ACE04632.1
TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT0633 ExbB/TolQ family protein.
  
     0.536
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
    0.486
ACE04537.1
PFAM: outer membrane efflux protein; KEGG: plt:Plut_0733 outer membrane efflux protein, putative.
 
     0.483
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.