STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04790.1PFAM: Mammalian cell entry related domain protein; KEGG: cte:CT0325 VpsC protein. (293 aa)    
Predicted Functional Partners:
ACE04788.1
PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140.
 
 0.994
ACE04789.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0326 ABC transporter, ATP-binding protein.
  
 0.988
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
 
   0.794
ACE04791.1
PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease, putative.
       0.684
ACE04787.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cch:Cag_0481 phosphoesterase PHP-like.
       0.611
ACE03500.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: plt:Plut_1648 hypothetical protein.
 
    0.547
ACE04537.1
PFAM: outer membrane efflux protein; KEGG: plt:Plut_0733 outer membrane efflux protein, putative.
 
   
 0.506
ACE03398.1
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cte:CT0266 bacterial surface antigen family protein.
 
    0.504
ACE03880.1
PFAM: cytochrome c assembly protein; KEGG: plt:Plut_1425 HemX protein, putative.
  
     0.487
ACE03594.1
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: plt:Plut_1585 TonB-like.
  
     0.484
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.