STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04791.1PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease, putative. (379 aa)    
Predicted Functional Partners:
ACE03231.1
PFAM: conserved hypothetical protein; KEGG: cte:CT2057 hypothetical protein.
  
 0.981
ACE04052.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0970 hypothetical protein.
  
 0.981
ACE03149.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT2124 beta-N-acetylglucosaminidase.
  
 0.971
ACE05335.1
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT0090 glycosyl hydrolase, family 3.
  
 0.948
ACE03230.1
PFAM: Na+/solute symporter; KEGG: plt:Plut_2009 sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.740
ACE03018.1
PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cte:CT2236 muramoyltetrapeptide carboxypeptidase, putative.
 
     0.686
ACE04790.1
PFAM: Mammalian cell entry related domain protein; KEGG: cte:CT0325 VpsC protein.
       0.684
ACE04789.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0326 ABC transporter, ATP-binding protein.
       0.611
ACE04788.1
PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140.
       0.550
ACE04787.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cch:Cag_0481 phosphoesterase PHP-like.
       0.533
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.