STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04860.1PFAM: DNA polymerase beta domain protein region; KEGG: mja:MJ1379 hypothetical protein. (96 aa)    
Predicted Functional Partners:
ACE04859.1
PFAM: protein of unknown function DUF86; KEGG: chy:CHY_2535 hypothetical protein.
 
  
 0.948
ACE04870.1
PFAM: protein of unknown function DUF86; KEGG: chy:CHY_2535 hypothetical protein.
 
  
 0.780
ACE04021.1
PFAM: protein of unknown function DUF86; KEGG: mma:MM_1164 hypothetical nucleotidyltransferase.
 
  
 0.773
ACE03823.1
PFAM: protein of unknown function DUF86; KEGG: lch:Lcho_0358 protein of unknown function DUF86.
 
  
 0.769
ACE04861.1
PFAM: S23 ribosomal protein; KEGG: gur:Gura_0834 S23 ribosomal protein.
       0.463
ACE04857.1
PFAM: protein of unknown function UPF0150; KEGG: cch:Cag_0609 hypothetical protein.
       0.440
ACE04858.1
KEGG: dsy:DSY3469 hypothetical protein.
       0.440
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.