STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04867.1KEGG: cyt:cce_3112 hypothetical protein. (96 aa)    
Predicted Functional Partners:
ACE04868.1
KEGG: cyb:CYB_1721 hypothetical protein.
 
     0.944
ACE04855.1
KEGG: cyb:CYB_1721 hypothetical protein.
 
     0.764
ACE04864.1
KEGG: gme:Gmet_1321 hypothetical protein.
 
     0.667
ACE04863.1
PFAM: YcfA family protein; KEGG: gme:Gmet_1322 YcfA-like.
 
     0.661
ACE04850.1
KEGG: gme:Gmet_1321 hypothetical protein.
  
     0.586
ACE04849.1
PFAM: YcfA family protein; KEGG: gme:Gmet_1322 YcfA-like.
  
     0.581
ACE04869.1
PFAM: protein of unknown function UPF0150; KEGG: cch:Cag_0609 hypothetical protein.
 
     0.562
ACE04193.1
KEGG: maq:Maqu_2675 hypothetical protein.
  
     0.501
ACE03045.1
PFAM: protein of unknown function DUF433; KEGG: ava:Ava_3038 protein of unknown function DUF433.
  
     0.494
ACE04194.1
KEGG: maq:Maqu_2676 hypothetical protein.
  
     0.482
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.