STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04882.1PFAM: protein of unknown function DUF86; KEGG: plt:Plut_1815 hypothetical protein. (136 aa)    
Predicted Functional Partners:
ACE04883.1
PFAM: DNA polymerase beta domain protein region; KEGG: plt:Plut_1816 hypothetical protein.
 
     0.945
ACE03213.1
PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1667 DNA polymerase, beta domain protein region.
 
     0.612
ACE03214.1
PFAM: protein of unknown function DUF86; KEGG: gme:Gmet_3258 protein of unknown function DUF86.
  
  
 
0.522
ACE04884.1
PFAM: S23 ribosomal protein; KEGG: gur:Gura_0834 S23 ribosomal protein.
       0.413
ACE04880.1
KEGG: syp:SYNPCC7002_C0014 hypothetical protein.
       0.401
ACE04881.1
KEGG: mhu:Mhun_3224 hypothetical protein.
       0.401
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.