STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04897.1PFAM: Cytochrome b/b6 domain; KEGG: cch:Cag_0395 cytochrome b-c complex, cytochrome b subunit. (431 aa)    
Predicted Functional Partners:
ACE04898.1
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: plt:Plut_1719 plastoquinol--plastocyanin reductase.
 
 0.998
ACE04506.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
  
 
 0.997
ACE04792.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: plt:Plut_0435 gamma-carotene desaturase.
 
 0.945
ACE04519.1
KEGG: cch:Cag_0643 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.936
nuoH
NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.925
ACE05265.1
TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ttj:TTHB128 arsenite oxidase, small subunit.
  
 0.905
nuoN
Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
  
 
 0.874
ACE04504.1
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
  
 
 0.856
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
   
  
 0.840
nuoA
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
  
 
 0.804
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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