STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04936.1PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1773 hypothetical protein. (260 aa)    
Predicted Functional Partners:
ACE04937.1
PFAM: LemA family protein; KEGG: cch:Cag_1774 LemA family protein.
 
    0.957
ACE04935.1
PFAM: protein of unknown function DUF477; KEGG: pvi:Cvib_0450 protein of unknown function DUF477.
 
     0.928
ACE04348.1
PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1771 hypothetical protein.
 
     0.730
ACE04934.1
KEGG: cch:Cag_0710 hypothetical protein.
       0.653
ACE04897.1
PFAM: Cytochrome b/b6 domain; KEGG: cch:Cag_0395 cytochrome b-c complex, cytochrome b subunit.
    
   0.529
ACE04898.1
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: plt:Plut_1719 plastoquinol--plastocyanin reductase.
  
   0.511
ACE04938.1
KEGG: sru:SRU_1533 hypothetical protein.
       0.497
ACE04504.1
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
    
   0.465
ACE04506.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
    
   0.465
ACE04792.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: plt:Plut_0435 gamma-carotene desaturase.
  
   0.439
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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