STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04950.1PFAM: surface antigen (D15); Patatin; KEGG: pvi:Cvib_0421 surface antigen (D15). (909 aa)    
Predicted Functional Partners:
ACE05383.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cte:CT0017 putative lipoprotein.
 
 
 0.798
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
 
  
 0.726
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.677
ACE03379.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: pvi:Cvib_1549 outer membrane chaperone Skp (OmpH).
 
  
 0.623
ACE05206.1
KEGG: plt:Plut_0174 hypothetical protein.
  
     0.607
bshC
KEGG: cte:CT1558 hypothetical protein; Belongs to the BshC family.
 
     0.570
ACE03159.1
PFAM: protein of unknown function DUF177; KEGG: cte:CT2111 hypothetical protein.
 
    0.541
ACE03575.1
PFAM: metallophosphoesterase; KEGG: plt:Plut_1594 hypothetical protein.
 
     0.526
ACE03397.1
KEGG: plt:Plut_1752 hypothetical protein.
  
 
 0.515
ACE03847.1
KEGG: cch:Cag_0491 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
  
  
 0.503
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.