STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bshCKEGG: cte:CT1558 hypothetical protein; Belongs to the BshC family. (563 aa)    
Predicted Functional Partners:
ACE03887.1
PFAM: LmbE family protein; KEGG: cch:Cag_1596 hypothetical protein.
 
   
 0.807
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.791
ACE04739.1
PFAM: glycosyl transferase group 1; KEGG: plt:Plut_0552 glycosyl transferase.
  
   
 0.790
ACE04950.1
PFAM: surface antigen (D15); Patatin; KEGG: pvi:Cvib_0421 surface antigen (D15).
 
     0.570
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
  
     0.432
ACE04236.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pvi:Cvib_0902 methyltransferase type 11.
  
   
 0.403
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.