STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04956.1KEGG: pvi:Cvib_0418 transcriptional regulator, fis family. (117 aa)    
Predicted Functional Partners:
ACE04955.1
KEGG: cte:CT1560 hypothetical protein.
 
     0.858
ACE04392.1
KEGG: pvi:Cvib_0981 hypothetical protein.
  
     0.585
ACE03627.1
KEGG: cte:CT0397 hypothetical protein.
  
     0.584
ACE04438.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1135 ATPase.
  
     0.580
ACE03109.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pvi:Cvib_1006 PHP C-terminal domain protein.
  
     0.574
ACE04962.1
KEGG: cte:CT1571 hypothetical protein.
 
     0.537
ACE05009.1
KEGG: pvi:Cvib_0377 hypothetical protein.
  
     0.529
ACE03760.1
KEGG: pvi:Cvib_1196 hypothetical protein.
  
     0.526
ACE04899.1
PFAM: hydroxyneurosporene synthase; KEGG: pvi:Cvib_1502 hydroxyneurosporene synthase.
  
     0.526
ACE04740.1
PFAM: S-adenosylmethionine synthetase (MAT); KEGG: cte:CT0540 S-adenosylmethionine synthase, archaeal-type.
  
     0.522
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.