Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE04982.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pvi:Cvib_0399 tetratricopeptide TPR_2 repeat protein. (214 aa)    
Predicted Functional Partners:
ACE03547.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cte:CT1629 TPR domain protein.
 
 
 0.748
ACE04530.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: plt:Plut_0741 TPR repeat.
 
 
 
 0.743
ACE04933.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28641 hypothetical protein.
  
     0.703
menF
Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
       0.568
ACE05123.1
PFAM: WD-40 repeat protein; KEGG: cte:CT1986 WD-repeat family protein.
  
 
  0.568
ACE03093.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: plt:Plut_0092 TPR repeat.
  
     0.551
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.540
ACE04408.1
PFAM: nuclear protein SET; KEGG: cte:CT0952 hypothetical protein.
  
 0.512
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.471
ACE03042.1
Hypothetical protein; KEGG: sco:SCO3294 transferase.
   
 0.459
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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