STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05008.1PFAM: Rhodanese domain protein; KEGG: ana:alr2407 hypothetical protein. (191 aa)    
Predicted Functional Partners:
ACE03893.1
KEGG: cte:CT1415 hypothetical protein.
 
     0.686
ACE03056.1
PFAM: Radical SAM domain protein; KEGG: cch:Cag_1591 hypothetical protein.
  
   
 0.649
ACE03892.1
PFAM: glycosyl transferase family 2; KEGG: cte:CT1416 glycosyl transferase.
  
     0.578
ACE05007.1
PFAM: protein of unknown function DUF975; KEGG: cte:CT0738 hypothetical protein.
       0.549
ACE04388.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.520
ACE05261.1
PFAM: thiamineS protein; KEGG: gvi:gsr4366 molybdenum cofactor biosynthesis protein D.
 
   
 0.517
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.477
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.465
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.443
ACE04023.1
KEGG: cyt:cce_0300 hypothetical protein.
  
     0.441
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.