Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE05021.1KEGG: cte:CT1876 hypothetical protein. (479 aa)    
Predicted Functional Partners:
ACE05022.1
KEGG: cya:CYA_0261 hypothetical protein.
 
     0.948
ACE05020.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA2316 enoyl-CoA hydratase.
       0.531
ACE05023.1
Hypothetical protein.
       0.488
ACE03363.1
PFAM: glutaredoxin 2; KEGG: pvi:Cvib_0697 glutaredoxin 2.
  
   
 0.424
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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