Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE05022.1KEGG: cya:CYA_0261 hypothetical protein. (353 aa)    
Predicted Functional Partners:
ACE05021.1
KEGG: cte:CT1876 hypothetical protein.
 
     0.948
ACE03810.1
PFAM: major facilitator superfamily MFS_1; KEGG: pvi:Cvib_1297 major facilitator superfamily MFS_1.
  
     0.676
ACE04499.1
KEGG: cch:Cag_1368 hypothetical protein.
  
     0.542
ACE05020.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA2316 enoyl-CoA hydratase.
       0.531
ACE03998.1
Methyltransferase type 11; PFAM: putative RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; KEGG: cte:CT0383 methlytransferase, putative.
  
     0.523
ACE04779.1
PFAM: Rhodanese domain protein; KEGG: cte:CT0843 hypothetical protein.
  
     0.517
ACE03491.1
KEGG: plt:Plut_1657 hypothetical protein.
  
     0.513
ACE03142.1
KEGG: pvi:Cvib_0185 hypothetical protein.
 
     0.512
ACE05023.1
Hypothetical protein.
       0.488
ACE03935.1
KEGG: cch:Cag_1145 hypothetical protein.
  
     0.452
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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