STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05032.1KEGG: plt:Plut_0297 hypothetical protein. (284 aa)    
Predicted Functional Partners:
ACE05031.1
PFAM: peptidase S16 lon domain protein; KEGG: plt:Plut_0298 ATP-dependent protease, putative.
 
     0.900
ACE04260.1
KEGG: hch:HCH_03617 hypothetical protein.
  
     0.577
ACE04499.1
KEGG: cch:Cag_1368 hypothetical protein.
  
    0.516
ACE03465.1
PFAM: Methyltransferase type 12; KEGG: pvi:Cvib_1458 methyltransferase type 11.
  
     0.480
ACE03542.1
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cch:Cag_1763 hypothetical protein.
  
  
 0.440
ACE03129.1
KEGG: noc:Noc_1786 hypothetical protein.
  
    0.411
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.