STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05054.1PFAM: glycosyl transferase family 2; KEGG: bth:BT_1709 putative glycosyltransferase. (271 aa)    
Predicted Functional Partners:
ACE04174.1
PFAM: glycosyl transferase family 2; KEGG: pvi:Cvib_0988 glycosyl transferase, family 2.
  
     0.739
ACE05053.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: nmu:Nmul_A2404 NAD-dependent epimerase/dehydratase.
  
    0.723
ACE04025.1
PFAM: glycosyl transferase family 2; KEGG: cte:CT1271 glycosyl transferase.
  
     0.712
ACE03346.1
PFAM: glycosyl transferase family 2; KEGG: sgl:SG0982 hypothetical protein.
  
     0.705
ACE04839.1
PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2592 glycosyltransferase domain protein.
  
     0.553
ACE04888.1
Capsular exopolysaccharide family; KEGG: pvi:Cvib_1075 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.