Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ACE05071.1PFAM: HipA domain protein; KEGG: pvi:Cvib_0660 HipA domain protein. (317 aa)    
Predicted Functional Partners:
ACE05072.1
TIGRFAM: HipA N-terminal domain protein; KEGG: pvi:Cvib_0661 hypothetical protein.
 
     0.947
ACE05073.1
TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: pvi:Cvib_0662 putative transcriptional regulator, XRE family.
 
     0.946
ACE03308.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_2771 transcriptional regulator, Cro/CI family.
 
 
 0.849
ACE05074.1
Hypothetical protein.
       0.746
ACE03518.1
KEGG: ppd:Ppro_1113 conserved hypothetical cytosolic protein.
     
 0.567
ACE03835.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_1039 filamentation induced by cAMP protein Fic.
 
     0.502
ACE05314.1
Plasmid maintenance system antidote protein, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bth:BT_4035 hypothetical protein.
 
     0.495
ACE03687.1
PFAM: PemK family protein; KEGG: plt:Plut_1919 transcriptional modulator of MazE/toxin, MazF.
    
 0.441
ACE03672.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: plt:Plut_1784 fic family protein.
 
     0.427
ACE04244.1
Transcriptional regulator/antitoxin, MazE; TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: vei:Veis_2467 SpoVT/AbrB domain protein.
     
 0.412
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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