STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05073.1TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: pvi:Cvib_0662 putative transcriptional regulator, XRE family. (68 aa)    
Predicted Functional Partners:
ACE05071.1
PFAM: HipA domain protein; KEGG: pvi:Cvib_0660 HipA domain protein.
 
     0.946
ACE05072.1
TIGRFAM: HipA N-terminal domain protein; KEGG: pvi:Cvib_0661 hypothetical protein.
 
     0.946
ACE05074.1
Hypothetical protein.
       0.746
ACE03835.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_1039 filamentation induced by cAMP protein Fic.
  
     0.540
ACE05314.1
Plasmid maintenance system antidote protein, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bth:BT_4035 hypothetical protein.
  
     0.477
ACE03672.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: plt:Plut_1784 fic family protein.
  
     0.425
ACE03188.1
KEGG: pdi:BDI_2985 putative excisionase.
  
     0.403
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.