STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05076.1PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cte:CT1903 BchE/P-methylase family protein. (509 aa)    
Predicted Functional Partners:
ACE05077.1
SMART: metal-dependent phosphohydrolase HD region; KEGG: pvi:Cvib_0352 metal dependent phosphohydrolase.
       0.768
ACE05078.1
KEGG: cte:CT1907 hypothetical protein.
       0.561
ACE05153.1
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; KEGG: cch:Cag_1810 bacteriochlorophyll 4-vinyl reductase.
  
  
 0.543
ACE05079.1
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1627 3-oxoadipate enol-lactonase, putative.
       0.521
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
       0.456
ACE03684.1
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:blr5799 hypothetical protein.
  
     0.416
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.