STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05130.1PFAM: phosphatidate cytidylyltransferase; KEGG: cte:CT1990 hypothetical protein. (237 aa)    
Predicted Functional Partners:
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
  
     0.752
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
  
     0.751
ACE05131.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1992 bacteriochlorophyll a synthase.
 
     0.751
ACE04208.1
KEGG: plt:Plut_0955 hypothetical protein.
  
     0.727
ACE03740.1
PFAM: cyclase/dehydrase; KEGG: cte:CT0537 hypothetical protein.
  
     0.724
ACE03742.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
  
     0.711
ACE05129.1
PFAM: metallophosphoesterase; KEGG: cte:CT1989 hypothetical protein.
       0.707
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
  
     0.690
ACE03741.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
  
     0.672
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
  
     0.640
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.