Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE05137.1PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pvi:Cvib_0301 aminotransferase, class V. (401 aa)    
Predicted Functional Partners:
ACE05136.1
PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: plt:Plut_0236 IscU protein.
 
 0.999
ACE04777.1
PFAM: SirA family protein; KEGG: pvi:Cvib_0036 SirA family protein; Belongs to the sulfur carrier protein TusA family.
   
 0.982
ACE04238.1
PFAM: Rhodanese domain protein; KEGG: sru:SRU_0931 putative thiosulfate sulfurtransferase, putative.
   
 0.919
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.888
ACE03603.1
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: gme:Gmet_1568 UBA/ThiF-type NAD/FAD binding fold:MoeZ/MoeB.
   
 0.867
ACE04928.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: plt:Plut_0398 NifU protein, putative.
 
 0.865
ACE05261.1
PFAM: thiamineS protein; KEGG: gvi:gsr4366 molybdenum cofactor biosynthesis protein D.
    
 0.855
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
 
 0.833
ACE03606.1
PFAM: SirA family protein; KEGG: mta:Moth_1968 SirA-like; Belongs to the sulfur carrier protein TusA family.
   
 0.829
ACE04303.1
PFAM: ferredoxin; KEGG: cte:CT1382 chlorosome envelope protein I.
  
 0.827
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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