STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05137.1PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pvi:Cvib_0301 aminotransferase, class V. (401 aa)    
Predicted Functional Partners:
ACE05136.1
PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: plt:Plut_0236 IscU protein.
 
 0.999
ACE03603.1
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: gme:Gmet_1568 UBA/ThiF-type NAD/FAD binding fold:MoeZ/MoeB.
   
 0.989
ACE04777.1
PFAM: SirA family protein; KEGG: pvi:Cvib_0036 SirA family protein; Belongs to the sulfur carrier protein TusA family.
   
 0.958
ACE04238.1
PFAM: Rhodanese domain protein; KEGG: sru:SRU_0931 putative thiosulfate sulfurtransferase, putative.
   
 0.918
ACE04303.1
PFAM: ferredoxin; KEGG: cte:CT1382 chlorosome envelope protein I.
  
 0.761
ACE04616.1
PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J.
  
 0.761
ACE04642.1
KEGG: cte:CT0612 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.751
ACE04928.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: plt:Plut_0398 NifU protein, putative.
 
 
 0.721
ACE05138.1
TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: plt:Plut_0234 cysteine synthase K/M/A.
  
  
 0.700
ACE03599.1
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: wsu:WS0691 LIN1550 protein.
 
  
 0.698
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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