STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05145.1KEGG: pvi:Cvib_0292 phosphoribosyltransferase. (230 aa)    
Predicted Functional Partners:
ACE03380.1
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cte:CT0255 DprA/SMF protein, putative DNA processing factor.
 
 
 0.891
ACE03921.1
PFAM: ComEC/Rec2-related protein; KEGG: plt:Plut_1346 ComEC/Rec2-related protein.
 
  
 0.824
ACE05144.1
Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
 
     0.747
ACE03006.1
PFAM: protein of unknown function UPF0102; KEGG: pvi:Cvib_0014 hypothetical protein; Belongs to the UPF0102 family.
 
    0.721
ACE05146.1
PFAM: ROK family protein; KEGG: cte:CT2007 glucokinase, putative.
       0.703
ACE05143.1
PFAM: protein of unknown function UPF0118; KEGG: pvi:Cvib_0294 protein of unknown function UPF0118.
       0.697
ACE05015.1
KEGG: plt:Plut_0305 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein.
  
  
 0.686
ACE03782.1
PFAM: DNA repair protein RadC; KEGG: cte:CT0611 DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.674
ACE05326.1
PFAM: Prephenate dehydrogenase; KEGG: pvi:Cvib_1692 prephenate dehydrogenase.
   
  
 0.643
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.612
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.