STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05210.1PFAM: glycosyl transferase group 1; KEGG: plt:Plut_0168 glycosyl transferase. (379 aa)    
Predicted Functional Partners:
ACE05209.1
PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1867 glycosyl transferase.
 
  
 0.841
ACE05208.1
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cch:Cag_1862 polysaccharide efflux transporter, putative.
  
  
 0.835
ACE05207.1
KEGG: cte:CT2205 hypothetical protein.
 
     0.814
ACE05206.1
KEGG: plt:Plut_0174 hypothetical protein.
       0.636
ACE05211.1
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: pvi:Cvib_0233 phosphotransferase system, phosphocarrier protein HPr.
       0.567
ACE03342.1
PFAM: glycosyl transferase group 1; KEGG: gvi:gll2465 probable glycosyltransferase.
  
     0.563
ACE04559.1
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: plt:Plut_0673 glucose-1-phosphate thymidylyltransferase.
 
  
 0.529
ACE04888.1
Capsular exopolysaccharide family; KEGG: pvi:Cvib_1075 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.435
ACE04695.1
SMART: Tetratricopeptide domain protein; KEGG: cte:CT1812 hypothetical protein.
  
     0.420
rpsL
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
     
 0.418
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.