Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE05232.1ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: plt:Plut_0873 ATPase. (724 aa)    
Predicted Functional Partners:
ACE05231.1
ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_0874 ATPase.
 
    
0.836
ACE05233.1
KEGG: plt:Plut_0872 outer membrane protein-like.
       0.773
ACE05230.1
KEGG: plt:Plut_0875 hypothetical protein.
  
  
 0.730
ACE05229.1
PFAM: protein of unknown function nitrogen fixation; KEGG: plt:Plut_0887 hypothetical protein.
       0.727
ACE04582.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA1805 HlyD family secretion protein.
 
 
 0.625
ACE03477.1
KEGG: ter:Tery_2034 RTX toxins and related Ca2+-binding protein.
 
  
 0.607
ACE03944.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cch:Cag_0987 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.566
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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