STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05295.1Hypothetical protein; KEGG: ana:alr2190 alpha-amylase. (66 aa)    
Predicted Functional Partners:
ACE05294.1
KEGG: bte:BTH_II0778 hypothetical protein.
       0.550
ACE03180.1
KEGG: mba:Mbar_A3002 hypothetical protein.
  
 
 0.531
ACE04412.1
PFAM: KWG Leptospira repeat protein; KEGG: cbh:CLC_1691 KWG leptospira repeat protein.
  
    0.508
ACE05296.1
Hypothetical protein.
       0.481
ACE03741.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
  
     0.477
ACE05297.1
KEGG: kpn:KPN_04038 putative acetyltransferase.
       0.456
ACE05298.1
Hypothetical protein.
       0.445
ACE04261.1
KEGG: ana:all0050 unknown protein.
 
     0.414
ACE03209.1
KEGG: pvi:Cvib_1672 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
 
 0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.