STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05314.1Plasmid maintenance system antidote protein, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bth:BT_4035 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ACE05315.1
KEGG: bth:BT_4036 hypothetical protein.
       0.784
ACE05313.1
KEGG: pvi:Cvib_0835 hypothetical protein.
       0.781
ACE05316.1
PFAM: type III restriction protein res subunit; KEGG: syp:SYNPCC7002_E0035 type III restriction-modification enzyme, R/helicase subunit.
       0.773
ACE05387.1
PFAM: plasmid maintenance system killer; KEGG: cyt:cce_1127 putative killer suppression protein HigA.
   
 
 0.600
ACE05312.1
Hypothetical protein.
       0.566
ACE05071.1
PFAM: HipA domain protein; KEGG: pvi:Cvib_0660 HipA domain protein.
 
     0.495
ACE05073.1
TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: pvi:Cvib_0662 putative transcriptional regulator, XRE family.
  
     0.477
ACE05072.1
TIGRFAM: HipA N-terminal domain protein; KEGG: pvi:Cvib_0661 hypothetical protein.
 
     0.464
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.430
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.