STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlpA-2Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (195 aa)    
Predicted Functional Partners:
ACE05369.1
PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: gfo:GFO_0122 methylated-DNA-[protein]-cysteine S-methyltransferase.
       0.746
ACE05367.1
KEGG: pvi:Cvib_1726 alpha/beta hydrolase fold.
 
 
   0.595
ACE05366.1
PFAM: Alkaline phosphatase; KEGG: pvi:Cvib_1725 alkaline phosphatase; Belongs to the alkaline phosphatase family.
       0.492
ACE04062.1
PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: cch:Cag_1379 peptidoglycan-binding LysM.
  
  
 0.472
ACE04271.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1102 probable ABC transporter permease protein.
  
 
   0.460
ACE04629.1
PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller.
  
 
 0.411
ACE04627.1
TIGRFAM: tol-pal system protein YbgF; KEGG: pvi:Cvib_1161 tetratricopeptide domain protein.
 
 
 0.403
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.