Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE05371.1Hypothetical protein; KEGG: lch:Lcho_3187 tetratricopeptide TPR_2 repeat protein. (441 aa)    
Predicted Functional Partners:
ACE05372.1
PFAM: PGAP1 family protein; KEGG: nfa:nfa28820 hypothetical protein.
  
   0.595
ACE03936.1
KEGG: lch:Lcho_1136 hypothetical protein.
  
 
  0.513
ACE05123.1
PFAM: WD-40 repeat protein; KEGG: cte:CT1986 WD-repeat family protein.
  
 
  0.494
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.471
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.460
ACE03042.1
Hypothetical protein; KEGG: sco:SCO3294 transferase.
   
 0.459
ACE04408.1
PFAM: nuclear protein SET; KEGG: cte:CT0952 hypothetical protein.
   
 0.443
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.442
ACE03710.1
KEGG: cte:CT1080 hypothetical protein.
    
  0.429
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
    
  0.428
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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