STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE05373.1PFAM: protein of unknown function DUF323; KEGG: cch:Cag_0037 hypothetical protein. (398 aa)    
Predicted Functional Partners:
ACE04239.1
TIGRFAM: methyltransferase; KEGG: bte:BTH_II1712 hypothetical protein.
 
  
 0.680
ACE03652.1
KEGG: hch:HCH_01953 serine/threonine protein phosphatase.
  
 
 0.615
ACE05330.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_20371 hypothetical protein.
  
  
 0.514
ACE03016.1
PFAM: aminotransferase class V; KEGG: saq:Sare_2039 aminotransferase class V.
  
  
 0.512
ACE04678.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
  
 
 0.471
ACE05374.1
Hypothetical protein.
       0.469
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
  
  
 0.440
ACE05015.1
KEGG: plt:Plut_0305 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein.
   
 
 0.438
ACE05371.1
Hypothetical protein; KEGG: lch:Lcho_3187 tetratricopeptide TPR_2 repeat protein.
  
  
 0.420
ACE04283.1
PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: plt:Plut_1820 RNA-directed DNA polymerase.
 
  
 0.415
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.